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Natural language understanding systems require a knowledge base provided with formal representations reflecting the structure of human beings' cognitive system. Although surface semantics can be sufficient in some other ...

Digital technologies have revolutionized studying, analyzing, and interpreting human culture, history, and society. Digital humanities (DH) combine traditional disciplines such as literature, history, and philosophy with...

Jacob Devlin, Ming-Wei Chang, Kenton Lee, Kristina Toutanova. Proceedings of the 2019 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, Volume 1 (Long...

Advances in next generation technologies have driven the costs of DNA sequencing down to the point that genotyping-by-sequencing (GBS) is now feasible for high diversity, large genome species. Here, we report a procedure...

BACKGROUND: Recent advances in proteomics technologies such as two-hybrid, phage display and mass spectrometry have enabled us to create a detailed map of biomolecular interaction networks. Initial mapping efforts have a...

A flexible statistical framework is developed for the analysis of read counts from RNA-Seq gene expression studies. It provides the ability to analyse complex experiments involving multiple treatment conditions and block...

MOTIVATION: Next-generation sequencing technologies generate very large numbers of short reads. Even with very deep genome coverage, short read lengths cause problems in de novo assemblies. The use of paired-end librarie...

The hallmarks of cancer conceptualization is a heuristic tool for distilling the vast complexity of cancer phenotypes and genotypes into a provisional set of underlying principles. As knowledge of cancer mechanisms has p...

A system-wide understanding of cellular function requires knowledge of all functional interactions between the expressed proteins. The STRING database aims to collect and integrate this information, by consolidating know...

Understanding the evolutionary history of living organisms is a central problem in biology. Until recently the ability to infer evolutionary relationships was limited by the amount of DNA sequence data available, but new...

An important part of our information-gathering behavior has always been to find out what other people think. With the growing availability and popularity of opinion-rich resources such as online review sites and personal...

An important part of our information-gathering behavior has always been to find out what other people think. With the growing availability and popularity of opinion-rich resources such as online review sites and personal...

Subjects / keywords: advanced computing, computational technologies, innovative applications, theoretical advancements, practical implementations, industry applications; Technology: Technology (General); Science: Science (General)

Subjects / keywords: DNA sequencing; Biology; Computational biology; Emerging technologies; Data science; Selection (genetic algorithm); Computer science; Genetics; DNA; Artificial intelligence

Subjects / keywords: sequencing technologies, genome editing and genome engineering, imaging technologies, single-molecule methods, computational methods, machine learning; Technology: Chemical technology: Biotechnology; Science: Chemistry: ...

Subjects / keywords: crop improvement, plant biotechnology, multi-omics technologies, crop protection & abiotic atress, computational biology & artificial intelligence; Agriculture: Agriculture (General); Technology: Chemical technology: Bio...

Subjects / keywords: antenna theory and practice, electromagnetic compatibility, microwave theory and techniques, computational electromagnetics, photonics, magnetic materials and technologies; Science: Physics: Electricity and magnetism

Subjects / keywords: computer science, computational mathematics, it education, digital economics, big data and applications, convergent cognitive information technologies; Science: Mathematics: Instruments and machines: Electronic computers...

Subjects / keywords: Computational biology; Biology; Profiling (computer programming); Phenotype; Transcriptome; Computer science; Genetics; Gene; Gene expression; Operating system

SUMMARY: It is expected that emerging digital gene expression (DGE) technologies will overtake microarray technologies in the near future for many functional genomics applications. One of the fundamental data analysis ta...