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The Open Visualization Tool (OVITO) is a new 3D visualization software designed for post-processing atomistic data obtained from molecular dynamics or Monte Carlo simulations. Unique analysis, editing and animations func...

The program Mercury , developed by the Cambridge Crystallographic Data Centre, is designed primarily as a crystal structure visualization tool. A new module of functionality has been produced, called the Materials Module...

Since its original release, the popular crystal structure visualization program Mercury has undergone continuous further development. Comparisons between crystal structures are facilitated by the ability to display multi...

VESTA is a three-dimensional visualization system for crystallographic studies and electronic state calculations. It has been upgraded to the latest version, VESTA 3 , implementing new features including drawing the exte...

UCSF ChimeraX is the next-generation interactive visualization program from the Resource for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. ChimeraX brings (a) significant performance and gr...

BACKGROUND: The Avogadro project has developed an advanced molecule editor and visualizer designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related are...

SUMMARY: We present here Blast2GO (B2G), a research tool designed with the main purpose of enabling Gene Ontology (GO) based data mining on sequence data for which no GO annotation is yet available. B2G joints in one app...

BACKGROUND: Functional annotation of differentially expressed genes is a necessary and critical step in the analysis of microarray data. The distributed nature of biological knowledge frequently requires researchers to n...

Data visualization is an essential component of genomic data analysis. However, the size and diversity of the data sets produced by today's sequencing and array-based profiling methods present major challenges to visuali...

UCSF ChimeraX is next-generation software for the visualization and analysis of molecular structures, density maps, 3D microscopy, and associated data. It addresses challenges in the size, scope, and disparate types of d...

The design, implementation, and capabilities of an extensible visualization system, UCSF Chimera, are discussed. Chimera is segmented into a core that provides basic services and visualization, and extensions that provid...

A cross-platform program, VESTA , has been developed to visualize both structural and volumetric data in multiple windows with tabs. VESTA represents crystal structures by ball-and-stick, space-filling, polyhedral, wiref...

Subjects / keywords: Computer science; Visualization; Functional magnetic resonance imaging; Software; Workstation; Magnetic resonance imaging; Transformation (genetics); Overlay; Artificial intelligence; Computer vision; Unix; Pattern recog...

Subjects / keywords: Visualization; Computer graphics (images); Software; Computer science; Computer vision; Artificial intelligence; Volume rendering; Data visualization; Rendering (computer graphics); Image processing; Volume (thermodynami...

UNLABELLED: Research over the last few years has revealed significant haplotype structure in the human genome. The characterization of these patterns, particularly in the context of medical genetic association studies, i...

This article describes several features in the MAFFT online service for multiple sequence alignment (MSA). As a result of recent advances in sequencing technologies, huge numbers of biological sequences are available and...

Subjects / keywords: imaging and visualization, biomechanics, biomedical engineering, software development, computer aided treatment, telemedicine; Technology: Chemical technology: Biotechnology

Digital technologies have revolutionized studying, analyzing, and interpreting human culture, history, and society. Digital humanities (DH) combine traditional disciplines such as literature, history, and philosophy with...

In a world where digital innovation reigns supreme, your journey to digital mastery begins here. “Digital Productivity: Mastering Tools for Success” is your indispensable guide to navigating the vast digital landscap...

Digital Scholar: Learning in the Age of Internet" is your gateway to a dynamic world where education and research flourish in the digital landscape. In an era defined by limitless information and global connectivity, thi...

The author addresses, in an original way and with a recognized methodological rigor, the study of the constructive conditions of urban housing that was promoted in the city of Manizales (central western Colombia) in a ti...

We are pleased to present to the entire academic community and the general public the following work, which contains recent research results of a group of teachers from the Faculty of Educational Sciences in areas such a...

New software, OLEX2 , has been developed for the determination, visualization and analysis of molecular crystal structures. The software has a portable mouse-driven workflow-oriented and fully comprehensive graphical use...

The WinGX suite provides a complete set of programs for the treatment of small-molecule single-crystal diffraction data, from data reduction and processing, structure solution, model refinement and visualization, and met...