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© 2016 The Linnean Society of London. An update of the Angiosperm Phylogeny Group (APG) classification of the orders and families of angiosperms is presented. Several new orders are recognized: Boraginales, Dilleniales,...

Materias / palabras clave: Phylogeny; Filogenia; Historical linguistics; Lingüística histórica

Materias / palabras clave: Filogenia; Phylogeny

Materias / palabras clave: Humanismo; Evolución; Phylogeny; Ontogeny; Evolution

Materias / palabras clave: taxonomy, morphology, anatomy, phylogeny (molecular or morphology-based), historical biogeography and palaeontology, arthropods; Science

The increase in the number of large data sets and the complexity of current probabilistic sequence evolution models necessitates fast and reliable phylogeny reconstruction methods. We describe a new approach, based on th...

The recently-developed statistical method known as the "bootstrap" can be used to place confidence intervals on phylogenies. It involves resampling points from one's own data, with replacement, to create a series of boot...

SUMMARY: The program MRBAYES performs Bayesian inference of phylogeny using a variant of Markov chain Monte Carlo. AVAILABILITY: MRBAYES, including the source code, documentation, sample data files, and an executable, is...

PhyML is a phylogeny software based on the maximum-likelihood principle. Early PhyML versions used a fast algorithm performing nearest neighbor interchanges to improve a reasonable starting tree topology. Since the origi...

Comparative studies of the relationship between two phenotypes, or between a phenotype and an environment, are frequently carried out by invalid statistical methods. Most regression, correlation, and contingency table me...

Bayesian inference of phylogeny using Markov chain Monte Carlo (MCMC) plays a central role in understanding evolutionary history from molecular sequence data. Visualizing and analyzing the MCMC-generated samples from the...

Phylogenies are extremely useful tools, not only for establishing genealogical relationships among a group of organisms or their parts (e.g. genes), but also for a variety of research once the phylogenies are estimated. ...

TreeView is a simple, easy to use phylogenetic tree viewing utility that runs under both MacOS (on Apple Macintosh computers) and under Microsoft Windows on Intel based computers, the two most common personal computers u...

jModelTest is a new program for the statistical selection of models of nucleotide substitution based on "Phyml" (Guindon and Gascuel 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum l...

Summary 1. Here, I present a new, multifunctional phylogenetics package, phytools, for the R statistical computing environment. 2. The focus of the package is on methods for phylogenetic comparative biology; however, it ...

Materias / palabras clave: molecular biology, biological structure analysis, genome analysis, sequence analysis, phylogeny, biological computation; Science: Biology (General): Genetics

Materias / palabras clave: taxonomy, ecophysiology, phylogeny, phylogeography, functional morphology, plant-animal relations; Science: Botany

Materias / palabras clave: plant sciences, ecology, taxonomy, systematics and phylogeny, plant reproductive biology, floristics; Science: Botany

Materias / palabras clave: cytology, cytosystematics, cytogenetics, mycology, phylogeny, histology; Science: Biology (General): Cytology

Materias / palabras clave: systematics, taxonomy, phylogeny, biogeography, faunistics, insects; Science: Biology (General); Science: Zoology

Materias / palabras clave: systematics, taxonomy, phylogeny, insects, biogeography, morphology; Science: Biology (General)

Materias / palabras clave: palaeoecology, palaeontology, biogeochemistry, earth system science, phylogeny; Science: Geology: Paleontology

Materias / palabras clave: insect science, biodiversity, phylogeny, taxonomy, entomology; Science: Science (General); Science: Biology (General): Life; Science: Zoology; Agriculture; Science: Biology (General): Ecology

Materias / palabras clave: fungi, mycology, taxonomy, phylogeny, ascomycota, yeast; Science: Microbiology: Microbial ecology