NODOVOX | Discovery

Functional genomics of tomato for the study of plant immunity

Article

Functional genomics of tomato for the study of plant immunity

Rosli, Hernan Guillermo et al · Oxford University Press · 2015 · ISSN 2041-2657

Tomato (Solanum lycopersicum), along with many other economically valuable species, belongs to the Solanaceae family. Understanding how plants in this family defend themselves against pathogens offers the opportunity of ...

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A genômica funcional no âmbito da produção animal: estado da arte e perspectivas Functional genomics in the field of animal science: state-of-the-art and perspectives

Article

A genômica funcional no âmbito da produção animal: estado da arte e perspectivas Functional genomics in the field of animal science: state-of-the-art and perspectives

Luiz Roberto Furlan et al · Sociedade Brasileira de Zootecnia · 2007 · ISSN 1516-3598

Os últimos vinte anos caracterizaram-se pela proliferação de tecnologias que tornaram possível decifrar o genoma das espécies, localizar e identificar particularidades na sua seqüência, elucidar as suas funções ...

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Modern Genomics Reshapes Soybean Cyst Nematode Research: Integrating Host Resistance, Nematode Virulence, and Functional Discovery

Article

Modern Genomics Reshapes Soybean Cyst Nematode Research: Integrating Host Resistance, Nematode Virulence, and Functional Discovery

Esmaeil Miraeiz et al · The American Phytopathological Society · 2026 · ISSN 0894-0282

The soybean cyst nematode (SCN), Heterodera glycines, remains the most damaging pathogen of soybean worldwide. Genomic advances over the past two decades have transformed our understanding of both the nematode and its ho...

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Molecular basis of a bacterial-amphibian symbiosis revealed by comparative genomics, modeling, and functional testing

Article

Molecular basis of a bacterial-amphibian symbiosis revealed by comparative genomics, modeling, and functional testing

Brunetti, Andrés Eduardo et al · Nature Publishing Group · 2021 · ISSN 1751-7362

The molecular bases for the symbiosis of the amphibian skin microbiome with its host are poorly understood. Here, we used the odor-producer Pseudomonas sp. MPFS and the treefrog Boana prasina as a model to explore bacter...

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Nutritional genomics: a practical approach by early life conditioning with dietary phosphorus Genômica nutricional: uma abordagem prática pelo condicionamento com fósforo dietético nos primeiros anos de vida

Article

Christopher M. Ashwell et al · Sociedade Brasileira de Zootecnia · 2010 · ISSN 1516-3598

The recent technologies that have led to the new field of functional genomics (how the genome of an organism regulates homeostasis and responds to stimuli) are providing a clearer understanding of how organisms interact ...

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Avanços recentes em nutrição de larvas de peixes Recent advances in nutrition of fish larval

Article

Avanços recentes em nutrição de larvas de peixes Recent advances in nutrition of fish larval

Luís Eugénio Castanheira da Conceição et al · Sociedade Brasileira de Zootecnia · 2009 · ISSN 1516-3598

Os requisitos nutricionais de larvas de peixes são ainda mal compreendidos, o que leva a altas mortalidades e problemas de qualidade no seu cultivo. Este trabalho pretende fazer uma revisão de novas metodologias de inv...

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Application of NgAgo-mediated genome editing in Mycobacterium smegmatis

Article

Application of NgAgo-mediated genome editing in Mycobacterium smegmatis

Li Zhao et al · American Society for Microbiology · 2025 · ISSN 0021-9193

ABSTRACT Mycobacterium smegmatis is nonpathogenic and fast-growing and is usually used as a model species of Mycobacterium. Studying basic metabolic mechanisms is crucial for accelerating mycobacterial research. Although...

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Chromosome-level genome assembly of Stellaria dichotoma reveals extensive transposable element proliferation in a traditional Chinese medicinal plant

Article

Chromosome-level genome assembly of Stellaria dichotoma reveals extensive transposable element proliferation in a traditional Chinese medicinal plant

Xiao-Yan Gan et al · Frontiers Media S.A · 2026 · ISSN 1664-462X

Stellaria Radix, known as Yinchaihu (YCH) in traditional Chinese medicine, is derived from the dried roots of Stellaria dichotoma L. var. lanceolata Bge. Despite its clinical importance in treating pediatric febrile cond...

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Effects of BST and high energy diet on gene expression in mammary parenchyma of dairy heifers

Article

Effects of BST and high energy diet on gene expression in mammary parenchyma of dairy heifers

Betina Joyce Lew et al · Sociedade Brasileira de Zootecnia · 2013 · ISSN 1806-9290

The objective of this study was to determine the effects of dietary energy and recombinant bovine somatotropin (bST) injection to identify genes that might control mammogenesis. Total RNA was extracted from the parenchym...

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Estudos de expressão gênica utilizando-se microarrays: delineamento, análise, e aplicações na pesquisa zootécnica Microarray gene expression studies: experimental design, statistical data analysis, and applications in livestock research

Article

Guilherme Jordão de Magalhães Rosa et al · Sociedade Brasileira de Zootecnia · 2007 · ISSN 1516-3598

A tecnologia de microarrays, ou microarranjos de DNA, possibilita a avaliação simultânea da expressão de milhares de genes em diferentes tecidos em determinado organismo, em diferentes estágios de desenvolvimento ou...

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Molecular and anatomical insights in Brassica napus L., for seed shattering pathways and breeding prospects for shatter resistance

Article

Molecular and anatomical insights in Brassica napus L., for seed shattering pathways and breeding prospects for shatter resistance

Noreen Amjad et al · Springer Nature · 2026 · ISSN 3005-1207

Abstract Among oilseeds crops, Brassica napus L., is of great importance globally. The economic yield and harvest efficiency are significantly limited by seed shattering, which represents a persistent agronomic constrain...

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Symbiotic and Pathogenic Interactions in the Rhizosphere

Article

Symbiotic and Pathogenic Interactions in the Rhizosphere

Tarek Hewezi et al · The American Phytopathological Society · 2026 · ISSN 0894-0282

The rhizosphere is one of the most dynamic biological environments on Earth. Within this narrow zone surrounding plant roots, plants interact constantly with diverse communities of microorganisms including bacteria, fung...

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Application of molecular information in sustainable animal breeding

Article

Application of molecular information in sustainable animal breeding

Dirk-Jan de Koning · Sociedade Brasileira de Zootecnia · 2008 · ISSN 1516-3598

Livestock genomics is aimed at dissecting the genetic control of variation in economically important trait, such as disease resistance and product yield/quality. Unraveling the genetic control of such complex traits rema...

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Multiomix: a cloud-based platform to infer cancer genomic and epigenomic events associated with gene expression modulation

Article

Multiomix: a cloud-based platform to infer cancer genomic and epigenomic events associated with gene expression modulation

Camele, Genaro et al · Oxford University Press · 2021 · ISSN 1367-4803

Motivation: Large-scale cancer genome projects have generated genomic, transcriptomic, epigenomic and clinicopathological data from thousands of samples in almost every human tumor site. Although most omics data and thei...

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Prediction of non-genotoxic carcinogenicity based on genetic profiles of short term exposure assays

Article

Prediction of non-genotoxic carcinogenicity based on genetic profiles of short term exposure assays

Perez, Luis Orlando et al · Korean Society of Toxicology · 2016 · ISSN 1976-8257

Non-genotoxic carcinogens are substances that induce tumorigenesis by non-mutagenic mechanisms and long term rodent bioassays are required to identify them. Recent studies have shown that transcription profiling can be a...

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Characterizing the Effector Repertoire of Plasmodiophora brassicae: Insights into Clubroot Pathogenesis

Article

Characterizing the Effector Repertoire of Plasmodiophora brassicae: Insights into Clubroot Pathogenesis

Emilee R. M. Storfie et al · The American Phytopathological Society · 2026 · ISSN 0894-0282

Plasmodiophora brassicae, the obligate parasite responsible for clubroot in Brassica crops and other crucifers, poses a major challenge to sustainable disease management due to its biotrophic lifestyle and adaptability. ...

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Complete genome sequence of Sphingomonas sp. gentR, a high-level gentamicin-resistant bacterium

Article

Complete genome sequence of Sphingomonas sp. gentR, a high-level gentamicin-resistant bacterium

Yi Liu et al · Nature Portfolio · 2026 · ISSN 2052-4463

Abstract We present the complete genome sequence of Sphingomonas sp. gentR, a strain exhibiting high-level resistance to gentamicin (MIC = 40 mg/mL). The genome was assembled from hybrid Illumina and Nanopore seque...

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DevStaR: high-throughput quantification of C. elegans developmental stages.

Article

DevStaR: high-throughput quantification of C. elegans developmental stages.

White, Amelia G. et al · Institute of Electrical and Electronics Engineers · 2013 · ISSN 1791-1803

We present DevStaR, an automated computer vision and machine learning system that provides rapid, accurate, and quantitative measurements of C. elegans embryonic viability in high-throughput (HTP) applications. A l...

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Genomic and transcriptomic insights into Trichomonascus vanleenenianus, a xylan-degrading yeast isolated from saproxylic insect larvae

Article

Genomic and transcriptomic insights into Trichomonascus vanleenenianus, a xylan-degrading yeast isolated from saproxylic insect larvae

Anita Boisramé et al · BMC · 2026 · ISSN 1471-2164

Abstract Studying microbial biodiversity offers enormous potential for improving the valorisation of plant biomass, particularly in conversion processes. Microorganisms, such as bacteria, fungi, yeasts and algae, play an...

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In silico comparative proteomics and structural analysis of Theileria species reveals conserved druggable targets for anti-theilerial therapy

Article

In silico comparative proteomics and structural analysis of Theileria species reveals conserved druggable targets for anti-theilerial therapy

Hizbullah Khan et al · BMC · 2026 · ISSN 1471-2180

Abstract Theileriosis, a tick-borne disease caused by apicomplexan parasites of the genus Theileria, poses a major constraint to livestock productivity worldwide. Existing chemotherapeutics are increasingly limited by ho...

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Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection

Article

Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection

Miguel Campos et al · BMC · 2026 · ISSN 1471-2229

Abstract Background Comparative genomics and plastome phylogenomics have advanced significantly in recent years, highlighting the diversity, possible admixture, and non-neutral evolution of the predominantly considered n...

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Prioritization of vigor QTL-associated genes for future genome-directed Vitis breeding

Article

Prioritization of vigor QTL-associated genes for future genome-directed Vitis breeding

Inés Hugalde et al · Facultad de Ciencias Agrarias. Universidad Nacional de Cuyo · 2021 · ISSN 0370-4661

Vigor control in grapevine may become especially important under climate change. A better understanding of gene-phenotype relationships is required in order to exploit plant genomics for breeding purposes. This research ...

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Two-dimensional nanostructures based ‘-onics’ and ‘-omics’ in personalized medicine

Article

Two-dimensional nanostructures based ‘-onics’ and ‘-omics’ in personalized medicine

Francis Bibi Mary et al · Wiley · 2022 · ISSN 2192-8606

With the maturing techniques for advanced synthesis and engineering of two-dimensional (2D) materials, its nanocomposites, hybrid nanostructures, alloys, and heterostructures, researchers have been able to create materia...

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Microarray analysis workflow based on a genetic algorithm to discover potential hub genes

Article

Microarray analysis workflow based on a genetic algorithm to discover potential hub genes

Carballido, Jessica Andrea · Bentham Science Publishers · 2022 · ISSN 1574-8936

This paper presents a sequence of steps oriented to gain biological knowledge from microar-ray gene expression data. The pipeline's core is a canonical multi-objective Genetic Algorithm (GA), which takes a gene expressio...

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