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MOTIVATION: Genomics has revolutionized biological research, but quality assessment of the resulting assembled sequences is complicated and remains mostly limited to technical measures like N50. RESULTS: We propose a mea...

Caffe provides multimedia scientists and practitioners with a clean and modifiable framework for state-of-the-art deep learning algorithms and a collection of reference models. The framework is a BSD-licensed C++ library...

This paper proposes a Fast Region-based Convolutional Network method (Fast R-CNN) for object detection. Fast R-CNN builds on previous work to efficiently classify object proposals using deep convolutional networks. Compa...

SUMMARY: The GTDB Toolkit (GTDB-Tk) provides objective taxonomic assignments for bacterial and archaeal genomes based on the Genome Taxonomy Database (GTDB). GTDB-Tk is computationally efficient and able to classify thou...

MOTIVATION: Fast and accurate quality control is essential for studies involving next-generation sequencing data. Whilst numerous tools exist to quantify QC metrics, there is no common approach to flexibly integrate thes...

Here, we describe the third major release of RELION. CPU-based vector acceleration has been added in addition to GPU support, which provides flexibility in use of resources and avoids memory limitations. Reference-free a...

Scanpy is a scalable toolkit for analyzing single-cell gene expression data. It includes methods for preprocessing, visualization, clustering, pseudotime and trajectory inference, differential expression testing, and sim...

The Open Visualization Tool (OVITO) is a new 3D visualization software designed for post-processing atomistic data obtained from molecular dynamics or Monte Carlo simulations. Unique analysis, editing and animations func...

Subjects / keywords: Computer science; Fortran; Scalability; Computational science; Python (programming language); Workstation; Byte; Identifier; Source code; Parallel computing; Supercomputer; Porting

Subjects / keywords: Computer science; Plug-in; Workflow; Software; Usability; Proteomics; Python (programming language); Data science; Data mining; Human–computer interaction; Programming language; Biology

Subjects / keywords: Computer science; Python (programming language); Scripting language; Executable; Computational science; User interface; Interface (matter); Graphical user interface; Compiler; User Friendly; Data structure; Fortran

Subjects / keywords: Computer science; Computer graphics (images); Scripting language; Visualization; Rendering (computer graphics); Molecular graphics; Programming language; Python (programming language); Graphics; Software; Computer graphi...

Abstract This study introduces an intelligent, large language model (LLM)–driven feedback system designed to assess and enhance students’ programming tasks through semantic comparison and pedagogically contextualized...

This study proposes and validates a conceptual framework using a sign language (SL) chatbot in the e-commerce domain to improve accessibility. Currently, the use of SL is a less-explored area in online platforms. It is d...

Subjects / keywords: UML (Computer science); Object-oriented programming (Computer science); Java (Computer program language); C++ (Computer program language); Python (Computer program language); Electronic books

We present VOSviewer, a freely available computer program that we have developed for constructing and viewing bibliometric maps. Unlike most computer programs that are used for bibliometric mapping, VOSviewer pays specia...

The methodology used to construct tree structured rules is the focus of this monograph. Unlike many other statistical procedures, which moved from pencil and paper to calculators, this text's use of trees was unthinkable...

A review of the literature suggests that few studies use formative indicator measurement models, even though they should. Therefore, the purpose of this research is to (a) discuss the distinction between formative and re...

Subjects / keywords: Construct validity; Construct (python library); Psychology; External validity; Organizational behavior; Knowledge management; Social psychology; Computer science; Psychometrics; Programming language; Clinical psychology

Social science research on stigma has grown dramatically over the past two decades, particularly in social psychology, where researchers have elucidated the ways in which people construct cognitive categories and link th...

Construct Validity in Psychological TestsVALIDATION of psychological tests has not yet been adequately concep tua1ized, as the APA Committee on Psychological Tests learned when it undertook to specify what qualities shou...

Journal Article Measuring the Involvement Construct Get access Judith Lynne Zaichkowsky Judith Lynne Zaichkowsky Search for other works by this author on: Oxford Academic PubMed Google Scholar Journal of Consumer Researc...

This paper differs from previous examinations of organizational learning in that it is broader in scope and more evaluative of the literatures. Four constructs related to organizational learning (knowledge acquisition, i...

The concept of school engagement has attracted increasing attention as representing a possible antidote to declining academic motivation and achievement. Engagement is presumed to be malleable, responsive to contextual f...