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El desarrollo de motores de búsqueda ha crecido en los últimos años gracias al uso de herramientas y frameworks open source, pues facilitan una base sobre la cual realizar nuestras aplicaciones orientadas a la extracc...

La presente obra busca introducir al lector en una línea de desarrollo de diseño de un producto en el que puede trabajar con técnicas de ingeniería inversa (escaneado 3D),manipulación del resultado del escaneo (nube...

La presente obra busca introducir al lector en una línea de desarrollo de diseño de un producto en el que puede trabajar con técnicas de ingeniería inversa (escaneo 3D),limpieza, alienado de los resultados del escane...

Java es uno de los lenguajes de programación más utilizados a nivel empresarial a la hora de desarrollar aplicaciones de gestión con buenos niveles de escalabilidad y disponibilidad. Además de tener sólidos conocimi...

Java es uno de los lenguajes de programación más utilizados a nivel empresarial a la hora de desarrollar aplicaciones de gestión con buenos niveles de escalabilidad y disponibilidad. Además de tener sólidos conocimi...

UNLABELLED: Unsupervised class discovery is a highly useful technique in cancer research, where intrinsic groups sharing biological characteristics may exist but are unknown. The consensus clustering (CC) method provides...

MOTIVATION: Accurate alignment of high-throughput RNA-seq data is a challenging and yet unsolved problem because of the non-contiguous transcript structure, relatively short read lengths and constantly increasing through...

MOTIVATION: Molecular simulation has historically been a low-throughput technique, but faster computers and increasing amounts of genomic and structural data are changing this by enabling large-scale automated simulation...

SUMMARY: Picante is a software package that provides a comprehensive set of tools for analyzing the phylogenetic and trait diversity of ecological communities. The package calculates phylogenetic diversity metrics, perfo...

UNLABELLED: The multiplex capability and high yield of current day DNA-sequencing instruments has made bacterial whole genome sequencing a routine affair. The subsequent de novo assembly of reads into contigs has been we...

Abstract Motivation: Robust large-scale sequence analysis is a major challenge in modern genomic science, where biologists are frequently trying to characterize many millions of sequences. Here, we describe a new Java-ba...

MOTIVATION: Genomics has revolutionized biological research, but quality assessment of the resulting assembled sequences is complicated and remains mostly limited to technical measures like N50. RESULTS: We propose a mea...

MOTIVATION: Next-generation sequencing technologies generate very large numbers of short reads. Even with very deep genome coverage, short read lengths cause problems in de novo assemblies. The use of paired-end librarie...

MOTIVATION: The enormous amount of short reads generated by the new DNA sequencing technologies call for the development of fast and accurate read alignment programs. A first generation of hash table-based methods has be...

MOTIVATION: A large choice of tools exists for many standard tasks in the analysis of high-throughput sequencing (HTS) data. However, once a project deviates from standard workflows, custom scripts are needed. RESULTS: W...

MOTIVATION: A new protocol for sequencing the messenger RNA in a cell, known as RNA-Seq, generates millions of short sequence fragments in a single run. These fragments, or 'reads', can be used to measure levels of gene ...

Subjects / keywords: Open source software; Spain; Electronic books

Subjects / keywords: Open source software; Spain; Electronic books

Subjects / keywords: Free computer software; Open source software; Electronic books

Subjects / keywords: Android (Electronic resource); Application software; Development; Open source software; Mobile computing

Subjects / keywords: Internet and older people; Internet; Social aspects; Open source software; Spain; Electronic books

Abstract Summary: The Biopython project is a mature open source international collaboration of volunteer developers, providing Python libraries for a wide range of bioinformatics problems. Biopython includes modules for ...