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Genome sequence analysis of Pseudomonas extremaustralis provides new insights into environmental adaptability and extreme conditions resistance
Article
Article
Raiger Iustman, Laura Judith et al · Springer Tokyo · 2015 · ISSN 1431-0651
The genome of the Antarctic bacterium Pseudomonas extremaustralis was analyzed searching for genes involved in environmental adaptability focusing on anaerobic metabolism, osmoregulation, cold adaptation, exopolysacchari...
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Open Access
Genome sequence of Bradyrhizobium yuanmingense strain P10 130, a highly efficient nitrogen-fixing bacterium that could be used for Desmodium incanum inoculation
Article
Article
Toniutti, Maria Antonieta et al · Elsevier Science · 2021 · ISSN 0378-1119
Strain P10 130, an isolated Bradyrhizobium strain from Argentina which promotes the growth of the leguminous plant Desmodium incanum by different mechanisms was previously selected as the best candidate for D. incanum in...
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Genome-wide identification of the UMAMIT gene family in Medicago sativa L. and analysis of the response of umamits mutant to abiotic stress
Article
Article
Hongbo Dai et al · BMC · 2026 · ISSN 1471-2229
Abstract Background Usually Multiple Amino acids Move In and Out Transporters (UMAMITs), belonging to the MtN21/EamA-like/UMAMIT superfamily, play vital roles in amino acid transport, nodule formation, and nitrogen fixat...
LCC TENDOkJvdGFueQ~~Idioma English
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Genome-Wide Association Study Implicates Immunogenetic Variation in Chemokine Signaling Pathways in Pediatric Tuberculosis Susceptibility
Article
Article
Christine Anterasian et al · Rockefeller University Press · 2026 · ISSN 3065-8993
IntroductionAlthough immune responses to Bacillus Calmette–Guérin (BCG) vaccination and susceptibility to mycobacterial infection vary across individuals, the underlying cellular mechanisms regulating this heterogenei...
LCC LCC:Immunologic diseases. AllergyIdioma English
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Genome-wide characterization of the LAC gene family in five fern species reveals evolutionary diversification and putative roles in lignin biosynthesis in Alsophila spinulosa
Article
Article
Ruixuan Chen et al · BMC · 2026 · ISSN 1471-2229
Abstract Background Laccases (LACs) are multicopper oxidases that play vital roles in lignin polymerization, cell wall formation, and various stress responses in plants. Despite their importance, genome-wide investigatio...
LCC TENDOkJvdGFueQ~~Idioma English
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Genome sequence-based species delimitation with confidence intervals and improved distance functions
Article
Article
Jan P. Meier‐Kolthoff; Alexander F. Auch; Hans-Peter Klenk; Markus Göker · BMC Bioinformatics · 2013
BACKGROUND: For the last 25 years species delimitation in prokaryotes (Archaea and Bacteria) was to a large extent based on DNA-DNA hybridization (DDH), a tedious lab procedure designed in the early 1970s that served its...
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Genome sequencing in microfabricated high-density picolitre reactors
Article
Article
Marcel Margulies; Michael D. Miller; William E. Altman; Said Attiya; Joel S. Bader; Lisa A. Bemben; Jan Berka; Michael Braverman · Nature · 2005
The proliferation of large-scale DNA-sequencing projects in recent years has driven a search for alternative methods to reduce time and cost. Here we describe a scalable, highly parallel sequencing system with raw throug...
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Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells
Article
Article
Ophir Shalem; Neville E. Sanjana; Ella Hartenian; Xi Shi; David Scott; Tarjei S. Mikkelsen; Dirk Heckl; Benjamin L. Ebert · Science · 2013
The simplicity of programming the CRISPR (clustered regularly interspaced short palindromic repeats)-associated nuclease Cas9 to modify specific genomic loci suggests a new way to interrogate gene function on a genome-wi...
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Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
Article
Article
Paul R. Burton; David G. Clayton; Lon R. Cardon; Nick Craddock; Panos Deloukas; Audrey Duncanson; Dominic Kwiatkowski; Mark I. McCarthy · Nature · 2007
There is increasing evidence that genome-wide association (GWA) studies represent a powerful approach to the identification of genes involved in common human diseases. We describe a joint GWA study (using the Affymetrix ...
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Genome engineering using the CRISPR-Cas9 system
Article
Article
F. Ann Ran; Patrick D. Hsu; Jason Wright; Vineeta Agarwala; David Scott; Feng Zhang · Nature Protocols · 2013
Subjects / keywords: CRISPR; Genome engineering; Cas9; Genome editing; Guide RNA; Biology; Computational biology; Nuclease; Genome; Homology directed repair; Synthetic biology; Non-homologous end joining
Idioma English
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Genome of <i>Epinotia</i> aporema granulovirus (EpapGV), a polyorganotropic fast killing betabaculovirus with a novel thymidylate kinase gene
Article
Article
Ferrelli, María Leticia et al · SEDICI UNLP · 2012
Background: Epinotia aporema (Lepidoptera: Tortricidae) is an important pest of legume crops in South America. Epinotia aporema granulovirus (EpapGV) is a baculovirus that causes a polyorganotropic infection in the host ...
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Chromosome-level genome assembly of Stellaria dichotoma reveals extensive transposable element proliferation in a traditional Chinese medicinal plant
Article
Article
Xiao-Yan Gan et al · Frontiers Media S.A · 2026 · ISSN 1664-462X
Stellaria Radix, known as Yinchaihu (YCH) in traditional Chinese medicine, is derived from the dried roots of Stellaria dichotoma L. var. lanceolata Bge. Despite its clinical importance in treating pediatric febrile cond...
LCC TENDOlBsYW50IGN1bHR1cmU~Idioma English
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Open Access
Chromosome-level genome provides new insights into the fatty acid biosynthesis and metabolism of the sea urchin Strongylocentrotus intermedius
Article
Article
Lingshu Han et al · BMC · 2026 · ISSN 1471-2164
Abstract Polyunsaturated fatty acids (PUFAs) are important nutrients that play critical roles in sea urchin reproduction and early development. Strongylocentrotus intermedius, the only commercially cultured sea urchin sp...
LCC TENDOkJpb3RlY2hub2xvZ3k~; LCC:GeneticsIdioma English
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Comparative Genome Analysis and Evaluation of Probiotic Characteristics of Lactobacillus plantarum Strain JDFM LP11
Article
Article
Jaeyoung Heo et al · Springer Nature · 2018 · ISSN 2636-0772
Abstract In the current study, the probiotic potential of approximately 250 strains of lactic acid bacteria (LAB) isolated from piglet fecal samples were investigated; among them Lactobacillus plantarum strain JDFM LP11,...
LCC TENDOkZvb2QgcHJvY2Vzc2luZyBhbmQgbWFudWZhY3R1cmU~; LCC:Animal cultureIdioma English
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Complete genome sequence of Colocasia bobone disease-associated virus, a putative cytorhabdovirus infecting taro
Article
Article
Higgins, Colleen M. et al · Springer Wien · 2016 · ISSN 0304-8608
We report the first genome sequence of a Colocasia bobone disease-associated virus (CBDaV) derived from bobone-affected taro [Colocasia esculenta L. Schott] from Solomon Islands. The negative-strand RNA genome is 12,193 ...
Idioma English
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Complete genome sequence of Streptococcus shenyangsis isolated from buccal mucosa
Article
Article
Seok Bin Yang et al · BMC · 2026 · ISSN 2730-6844
Abstract Objective Streptococcus shenyangsis is a recently reported member of the genus Streptococcus, rarely detected in the human oral cavity and for which genomic information remains limited. To broaden our understand...
LCC LCC:GeneticsIdioma English
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Open Access
Draft genome sequence of Lactobacillus delbrueckii subsp. bulgaricus CRL871, a folate producing strain isolated from a Northwestern Argentinean yogurt
Article
Article
Laiño, Jonathan Emiliano et al · American Society for Microbiology · 2015 · ISSN 2169-8287
Lactobacillus delbrueckii subsp. bulgaricus CRL871 is the first strain of L. delbrueckii subsp. bulgaricus reported as a folateproducing strain. We report the draft genome sequence of L. delbrueckii subsp. bulgaricus CRL...
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Open Access
Draft genome sequence of Lactobacillus plantarum CRL1506, an immunomodulatory strain isolated from goat milk
Article
Article
Saavedra, Maria Lucila et al · American Society for Microbiology · 2016 · ISSN 2169-8287
This report describes a draft genome sequence of Lactobacillus plantarum CRL1506, a probiotic strain with immunomodulatory properties isolated from goat milk. The reads generated by a whole-genome shotgun (WGS) strategy ...
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Exploring the Genome of Fructobacillus tropaeoli CRL 2034, a Fig-Origin Strain that Produces High Levels of Mannitol from Fructose
Article
Article
Ruiz Rodríguez, Luciana Gabriela et al · Springer · 2020 · ISSN 0343-8651
We report the draft genome sequence of Fructobacillus tropaeoli CRL 2034, a strain isolated from ripe fig in Tucumán province, Argentina. The interest in studying the genome of this fructophilic lactic acid bacterium st...
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LHP1 Regulates H3K27me3 Spreading and Shapes the Three-Dimensional Conformation of the Arabidopsis Genome
Article
Article
Veluchamy, Alaguraj et al · Public Library of Science · 2016 · ISSN 1932-6203
Precise expression patterns of genes in time and space are essential for proper development of multicellular organisms. Dynamic chromatin conformation and spatial organization of the genome constitute a major step in thi...
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Material complementario
Legal reflections on the case of genome-edited babies
Article
Article
Shuang Liu · KeAi Communications Co., Ltd · 2020 · ISSN 2397-0642
Abstract Human genome-editing is banned by guidelines, laws and regulations in most countries. However, the first criminal case on genome-edited babies was sentenced in China in 2019. In this commentary we discuss our le...
LCC LCC:Public aspects of medicineIdioma English
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Meta-analysis of genome-wide association from genomic prediction models
Article
Article
Bernal Rubio, Yeni Liliana et al · Wiley · 2015 · ISSN 0268-9146
Genome-wide association (GWA) studies based on GBLUP models are a common practice in animal breeding. However, effect sizes of GWA tests are small, requiring larger sample sizes to enhance power of detection of rare vari...
Idioma English
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Open Access
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