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Materias / palabras clave: Computer science; Software portability; Implementation; Ontology; Programming language; Vocabulary; Reuse; Knowledge representation and reasoning; Natural language processing; Ontology language; Software engineering; Art...

Materias / palabras clave: Biology; Organism; Gene; Computational biology; Ontology; Function (biology); Gene ontology; Vocabulary; Controlled vocabulary; Genetics; World Wide Web; Computer science

The term Federated Databases refers to the data integration of distributed, autonomous and heterogeneous databases. However, a federation can also include information systems, not only databases. At integrating data, sev...

Users of Institutional Repositories and Digital Libraries are known by their needs for very specific information about one or more subjects. To characterize users profiles and offer them new documents and resources is on...

Quality models for software architecture are taxonomies of quality attributes, commonly used to specify and evaluate nonfunctionalrequirements. Most quality models offer a two-level approach, distinguishing externally ob...

"Process modeling forms a core activity in many organizations in which different entities and stakeholders interact for smooth operation and management of enterprises. There have been few work on semantically labeling ...

The active use and manipulation of visual representations makes many complex and intensive cognitive tasks feasible. A visual representation is able to convey relationships among many elements in parallel and it provides...

BACKGROUND: Functional annotation of differentially expressed genes is a necessary and critical step in the analysis of microarray data. The distributed nature of biological knowledge frequently requires researchers to n...

The explosion of image data on the Internet has the potential to foster more sophisticated and robust models and algorithms to index, retrieve, organize and interact with images and multimedia data. But exactly how such ...

Proteins and their functional interactions form the backbone of the cellular machinery. Their connectivity network needs to be considered for the full understanding of biological phenomena, but the available information ...

Presentation of a web collection platform designed to relate and unify information available on different standard web sources with a view to creating a userbrowseable thematic repository. The platform will be used at th...

KEGG (http://www.kegg.jp/ or http://www.genome.jp/kegg/) is an encyclopedia of genes and genomes. Assigning functional meanings to genes and genomes both at the molecular and higher levels is the primary objective of the...

SUMMARY: We present here Blast2GO (B2G), a research tool designed with the main purpose of enabling Gene Ontology (GO) based data mining on sequence data for which no GO annotation is yet available. B2G joints in one app...

The MEME Suite web server provides a unified portal for online discovery and analysis of sequence motifs representing features such as DNA binding sites and protein interaction domains. The popular MEME motif discovery a...