Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

Maxim V. Kuleshov; Matthew R. Jones; Andrew D. Rouillard; Nicolas Fernandez; Qiaonan Duan; Zichen Wang; Simon Koplev; Sherry L. Jenkins · Nucleic Acids Research · 2016

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Author / responsible party

Maxim V. Kuleshov; Matthew R. Jones; Andrew D. Rouillard; Nicolas Fernandez; Qiaonan Duan; Zichen Wang; Simon Koplev; Sherry L. Jenkins

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Nucleic Acids Research

Year

2016

Language

English

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Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and download. In total, Enrichr currently contains 180 184 annotated gene sets from 102 gene set libraries. New features have been added to Enrichr including the ability to submit fuzzy sets, upload BED files, improved application programming interface and visualization of the results as clustergrams. Overall, Enrichr is a comprehensive resource for curated gene sets and a search engine that accumulates biological knowledge for further biological discoveries. Enrichr is freely available at: http://amp.pharm.mssm.edu/Enrichr.

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APA 7

Kuleshov, M. V, Jones, M. R, Rouillard, A. D, Fernandez, N, Duan, Q, Wang, Z, Koplev, S, & Jenkins, S. L. (2016). Enrichr: a comprehensive gene set enrichment analysis web server 2016 update. https://doi.org/10.1093/nar/gkw377

MLA

Kuleshov, Maxim V, et al. "Enrichr: a comprehensive gene set enrichment analysis web server 2016 update." 2016. https://doi.org/10.1093/nar/gkw377.

Chicago

Kuleshov, Maxim V, Matthew R. Jones, Andrew D. Rouillard, Nicolas Fernandez, Qiaonan Duan, Zichen Wang, Simon Koplev, and Sherry L. Jenkins. 2016. "Enrichr: a comprehensive gene set enrichment analysis web server 2016 update.". https://doi.org/10.1093/nar/gkw377.

Harvard

Kuleshov, M. V. et al. 2016, Enrichr: a comprehensive gene set enrichment analysis web server 2016 update, Nucleic Acids Research, available at: https://doi.org/10.1093/nar/gkw377 [Accessed 8 Aug. 2026].

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Title: Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

Author / contributors: Maxim V. Kuleshov; Matthew R. Jones; Andrew D. Rouillard; Nicolas Fernandez; Qiaonan Duan; Zichen Wang; Simon Koplev; Sherry L. Jenkins

Publisher: Nucleic Acids Research

Publication year: 2016

Language: English

Subjects

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Upload; Biology; Set (abstract data type); Web server; Interface (matter); Visualization; Computational biology; Gene; Application programming interface; Genome; Gene nomenclature; The Internet