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NCBI GEO: archive for functional genomics data sets—update

Tanya Barrett; Stephen E. Wilhite; Pierre Ledoux; Carlos Evangelista; Irene F. Kim; Maxim Tomashevsky; Kimberly A. Marshall; Katherine Phillippy · Nucleic Acids Research · 2012

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Author / responsible party
Tanya Barrett; Stephen E. Wilhite; Pierre Ledoux; Carlos Evangelista; Irene F. Kim; Maxim Tomashevsky; Kimberly A. Marshall; Katherine Phillippy
Publisher
Nucleic Acids Research
Year
2012
Language
English

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The Gene Expression Omnibus (GEO, http://www.ncbi.nlm.nih.gov/geo/) is an international public repository for high-throughput microarray and next-generation sequence functional genomic data sets submitted by the research community. The resource supports archiving of raw data, processed data and metadata which are indexed, cross-linked and searchable. All data are freely available for download in a variety of formats. GEO also provides several web-based tools and strategies to assist users to query, analyse and visualize data. This article reports current status and recent database developments, including the release of GEO2R, an R-based web application that helps users analyse GEO data.

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APA 7

Barrett, T, Wilhite, S. E, Ledoux, P, Evangelista, C, Kim, I. F, Tomashevsky, M, Marshall, K. A, & Phillippy, K. (2012). NCBI GEO: archive for functional genomics data sets—update. https://doi.org/10.1093/nar/gks1193

MLA

Barrett, Tanya, et al. "NCBI GEO: archive for functional genomics data sets—update." 2012. https://doi.org/10.1093/nar/gks1193.

Chicago

Barrett, Tanya, Stephen E. Wilhite, Pierre Ledoux, Carlos Evangelista, Irene F. Kim, Maxim Tomashevsky, Kimberly A. Marshall, and Katherine Phillippy. 2012. "NCBI GEO: archive for functional genomics data sets—update.". https://doi.org/10.1093/nar/gks1193.

Harvard

Barrett, T. et al. 2012, NCBI GEO: archive for functional genomics data sets—update, Nucleic Acids Research, available at: https://doi.org/10.1093/nar/gks1193 [Accessed 7 Aug. 2026].

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Title
NCBI GEO: archive for functional genomics data sets—update
Author / contributors
Tanya Barrett; Stephen E. Wilhite; Pierre Ledoux; Carlos Evangelista; Irene F. Kim; Maxim Tomashevsky; Kimberly A. Marshall; Katherine Phillippy
Publisher
Nucleic Acids Research
Publication year
2012
Language
English

Subjects

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Metadata; Download; Biology; Raw data; Genomics; The Internet; Resource (disambiguation); Variety (cybernetics); Functional genomics; World Wide Web; Data science; Information retrieval
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