The Amber biomolecular simulation programs

David A. Case; Thomas E. Cheatham; Tom Darden; Holger Gohlke; Ray Luo; Kenneth M. Merz; Alexey V. Onufriev; Carlos Simmerling · Journal of Computational Chemistry · 2005

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Author / responsible party

David A. Case; Thomas E. Cheatham; Tom Darden; Holger Gohlke; Ray Luo; Kenneth M. Merz; Alexey V. Onufriev; Carlos Simmerling

Publisher

Journal of Computational Chemistry

Year

2005

Language

English

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We describe the development, current features, and some directions for future development of the Amber package of computer programs. This package evolved from a program that was constructed in the late 1970s to do Assisted Model Building with Energy Refinement, and now contains a group of programs embodying a number of powerful tools of modern computational chemistry, focused on molecular dynamics and free energy calculations of proteins, nucleic acids, and carbohydrates.

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APA 7

Case, D. A, Cheatham, T. E, Darden, T, Gohlke, H, Luo, R, Merz, K. M, Alexey V. Onufriev, & Simmerling, C. (2005). The Amber biomolecular simulation programs. https://doi.org/10.1002/jcc.20290

MLA

Case, David A, et al. "The Amber biomolecular simulation programs." 2005. https://doi.org/10.1002/jcc.20290.

Chicago

Case, David A, Thomas E. Cheatham, Tom Darden, Holger Gohlke, Ray Luo, Kenneth M. Merz, Alexey V. Onufriev, and Carlos Simmerling. 2005. "The Amber biomolecular simulation programs.". https://doi.org/10.1002/jcc.20290.

Harvard

Case, D. A. et al. 2005, The Amber biomolecular simulation programs, Journal of Computational Chemistry, available at: https://doi.org/10.1002/jcc.20290 [Accessed 7 Aug. 2026].

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Title: The Amber biomolecular simulation programs

Author / contributors: David A. Case; Thomas E. Cheatham; Tom Darden; Holger Gohlke; Ray Luo; Kenneth M. Merz; Alexey V. Onufriev; Carlos Simmerling

Publisher: Journal of Computational Chemistry

Publication year: 2005

Language: English

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