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De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

Brian J. Haas; Alexie Papanicolaou; Moran Yassour; Manfred Grabherr; Philip D. Blood; Joshua C. Bowden; Matthew Brian Couger; David Eccles · Nature Protocols · 2013

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Author / responsible party
Brian J. Haas; Alexie Papanicolaou; Moran Yassour; Manfred Grabherr; Philip D. Blood; Joshua C. Bowden; Matthew Brian Couger; David Eccles
Publisher
Nature Protocols
Year
2013
Language
English

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APA 7

Haas, B. J, Papanicolaou, A, Yassour, M, Grabherr, M, Blood, P. D, Bowden, J. C, Couger, M. B, & Eccles, D. (2013). De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis. https://doi.org/10.1038/nprot.2013.084

MLA

Haas, Brian J, et al. "De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis." 2013. https://doi.org/10.1038/nprot.2013.084.

Chicago

Haas, Brian J, Alexie Papanicolaou, Moran Yassour, Manfred Grabherr, Philip D. Blood, Joshua C. Bowden, Matthew Brian Couger, and David Eccles. 2013. "De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis.". https://doi.org/10.1038/nprot.2013.084.

Harvard

Haas, B. J. et al. 2013, De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis, Nature Protocols, available at: https://doi.org/10.1038/nprot.2013.084 [Accessed 8 Aug. 2026].

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Title
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
Author / contributors
Brian J. Haas; Alexie Papanicolaou; Moran Yassour; Manfred Grabherr; Philip D. Blood; Joshua C. Bowden; Matthew Brian Couger; David Eccles
Publisher
Nature Protocols
Publication year
2013
Language
English

Subjects

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Computational biology; Bioconductor; RNA-Seq; Sequence assembly; Workflow; Transcriptome; Biology; De novo transcriptome assembly; Genome; Reference genome; Computer science; Sequence analysis
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