News Help Institutional access
Back to results
Bibliographic record · Consultation and access
Artículo

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

Felix Krueger; Simon Andrews · Bioinformatics · 2011

Resource page
Quick overview. Review the resource’s basic details, then access the content using the main button. This page shows only the information needed to identify, cite, and open the work.
Author / responsible party
Felix Krueger; Simon Andrews
Publisher
Bioinformatics
Year
2011
Language
English

Resource access

Open the content from the main option or choose another available source.

OpenAlex OpenAlex Works
Entrar por OpenAlex
Main access

Resource page

Resource reference page. Full text availability has not been automatically confirmed.
Open resource

Summary

Descripción general del contenido del recurso.

SUMMARY: A combination of bisulfite treatment of DNA and high-throughput sequencing (BS-Seq) can capture a snapshot of a cell's epigenomic state by revealing its genome-wide cytosine methylation at single base resolution. Bismark is a flexible tool for the time-efficient analysis of BS-Seq data which performs both read mapping and methylation calling in a single convenient step. Its output discriminates between cytosines in CpG, CHG and CHH context and enables bench scientists to visualize and interpret their methylation data soon after the sequencing run is completed. AVAILABILITY AND IMPLEMENTATION: Bismark is released under the GNU GPLv3+ licence. The source code is freely available from www.bioinformatics.bbsrc.ac.uk/projects/bismark/.

How to cite

Elegí el formato que necesitás y copiá la referencia al portapapeles.

APA 7

Krueger, F. & Andrews, S. (2011). Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications. https://doi.org/10.1093/bioinformatics/btr167

MLA

Krueger, Felix, and Simon Andrews. "Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications." 2011. https://doi.org/10.1093/bioinformatics/btr167.

Chicago

Krueger, Felix and Simon Andrews. 2011. "Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.". https://doi.org/10.1093/bioinformatics/btr167.

Harvard

Krueger, F. and Andrews, S. 2011, Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications, Bioinformatics, available at: https://doi.org/10.1093/bioinformatics/btr167 [Accessed 9 Aug. 2026].

Share and print

Save the record, copy its permanent link, or print it as a PDF.

Export reference

You can export the record in common formats for use in a reference manager.

RIS BibTeX

Resource details

Bibliographic information to help confirm that this is the correct material.

Title
Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
Author / contributors
Felix Krueger; Simon Andrews
Publisher
Bioinformatics
Publication year
2011
Language
English

Subjects

Explore related resources through these subjects.

DNA methylation; Bisulfite sequencing; Computer science; Snapshot (computer storage); Computational biology; Methylation; CpG site; Context (archaeology); Biology; Genetics; DNA; Database
Copied