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Estimating the mutual information between two discrete, asymmetric variables with limited samples

Hernández Lahme, Damián Gabriel et al · Molecular Diversity Preservation International · 2019

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Determining the strength of nonlinear, statistical dependencies between two variables is a crucial matter in many research fields. The established measure for quantifying such relations is the mutual information. However, estimating mutual information from limited samples is a challenging task. Since the mutual information is the difference of two entropies, the existing Bayesian estimators of entropy may be used to estimate information. This procedure, however, is still biased in the severely under-sampled regime. Here, we propose an alternative estimator that is applicable to those cases in which the marginal distribution of one of the two variables?the one with minimal entropy?is well sampled. The other variable, as well as the joint and conditional distributions, can be severely undersampled. We obtain a consistent estimator that presents very low bias, outperforming previous methods even when the sampled data contain few coincidences. As with other Bayesian estimators, our proposal focuses on the strength of the interaction between the two variables, without seeking to model the specific way in which they are related. A distinctive property of our method is that the main data statistics determining the amount of mutual information is the inhomogeneity of the conditional distribution of the low-entropy variable in those states in which the large-entropy variable registers coincidences. Fil: Hernández Lahme, Damián Gabriel. Comisión Nacional de Energía Atómica. Gerencia del Área de Investigación y Aplicaciones No Nucleares. Gerencia de Física (Centro Atómico Bariloche); Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina Fil: Samengo, Ines. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Comisión Nacional de Energía Atómica. Gerencia del Área de Investigación y Aplicaciones No Nucleares. Gerencia de Física (Centro Atómico Bariloche); Argentina

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APA 7

Hernández Lahme, D. G. E. A. (2019). Estimating the mutual information between two discrete, asymmetric variables with limited samples. http://hdl.handle.net/11336/121475

MLA

Hernández Lahme, Damián Gabriel et al. "Estimating the mutual information between two discrete, asymmetric variables with limited samples." 2019. http://hdl.handle.net/11336/121475.

Chicago

Hernández Lahme, Damián Gabriel et al. 2019. "Estimating the mutual information between two discrete, asymmetric variables with limited samples.". http://hdl.handle.net/11336/121475.

Harvard

Hernández Lahme, D. G. E. A. 2019, Estimating the mutual information between two discrete, asymmetric variables with limited samples, Molecular Diversity Preservation International, available at: http://hdl.handle.net/11336/121475 [Accessed 8 Aug. 2026].

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Title
Estimating the mutual information between two discrete, asymmetric variables with limited samples
Author / contributors
Hernández Lahme, Damián Gabriel et al
Publisher
Molecular Diversity Preservation International
Publication year
2019
ISSN
1099-4300
ISSN
1099-4300
Language
English

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